$59 from a dealer for an engine air filter wasn't too bad and I have seen far worse charges. The cabin air filter is often ignored so it was good that they changed it. Alignment is important but I would always go to an independent shop for that because not only will it be less expensive they usually are far more knowledgeable about the process and do better work.
As Save noted, make sure to check your maintenance schedule because dealerships love to suggest high margin optional service that is not needed and they often do a great job of convincing customers that is it a required critical service. There used to be a Buick GMC dealer in the area who made a killing selling what they called "mandatory fuel system service for fuel injected engines". The service was billed at $229.95 and consisted of the tech pouring a $10 (retail pricing) bottle of Techron into the gas tank and driving the car for three miles, probably the most profitable line item in the entire service department.